VTK  9.3.20240419
vtkNewickTreeReader.h
Go to the documentation of this file.
1 // SPDX-FileCopyrightText: Copyright (c) Ken Martin, Will Schroeder, Bill Lorensen
2 // SPDX-License-Identifier: BSD-3-Clause
22 #ifndef vtkNewickTreeReader_h
23 #define vtkNewickTreeReader_h
24 
25 #include "vtkDataReader.h"
26 #include "vtkIOInfovisModule.h" // For export macro
27 
28 VTK_ABI_NAMESPACE_BEGIN
29 class vtkDoubleArray;
31 class vtkStringArray;
32 class vtkTree;
33 
34 class VTKIOINFOVIS_EXPORT vtkNewickTreeReader : public vtkDataReader
35 {
36 public:
39  void PrintSelf(ostream& os, vtkIndent indent) override;
40 
42 
46  vtkTree* GetOutput(int idx);
47  void SetOutput(vtkTree* output);
48  int ReadNewickTree(const char* buffer, vtkTree& tree);
50 
54  int ReadMeshSimple(VTK_FILEPATH const std::string& fname, vtkDataObject* output) override;
55 
56 protected:
59 
61  void CountNodes(const char* buffer, vtkIdType* numNodes);
63  vtkStringArray* names, vtkIdType parent);
64 
65 private:
67  void operator=(const vtkNewickTreeReader&) = delete;
68 };
69 
70 VTK_ABI_NAMESPACE_END
71 #endif
general representation of visualization data
helper superclass for objects that read vtk data files
Definition: vtkDataReader.h:44
dynamic, self-adjusting array of double
a simple class to control print indentation
Definition: vtkIndent.h:108
Store vtkAlgorithm input/output information.
An editable directed graph.
read vtkTree from Newick formatted file
void SetOutput(vtkTree *output)
Get the output of this reader.
int ReadNewickTree(const char *buffer, vtkTree &tree)
Get the output of this reader.
int FillOutputPortInformation(int, vtkInformation *) override
Fill the output port information objects for this algorithm.
vtkIdType BuildTree(char *buffer, vtkMutableDirectedGraph *g, vtkDoubleArray *weights, vtkStringArray *names, vtkIdType parent)
void PrintSelf(ostream &os, vtkIndent indent) override
Methods invoked by print to print information about the object including superclasses.
~vtkNewickTreeReader() override
void CountNodes(const char *buffer, vtkIdType *numNodes)
vtkTree * GetOutput()
Get the output of this reader.
vtkTree * GetOutput(int idx)
Get the output of this reader.
int ReadMeshSimple(VTK_FILEPATH const std::string &fname, vtkDataObject *output) override
Actual reading happens here.
static vtkNewickTreeReader * New()
a vtkAbstractArray subclass for strings
A rooted tree data structure.
Definition: vtkTree.h:145
@ string
Definition: vtkX3D.h:490
int vtkIdType
Definition: vtkType.h:315
#define VTK_FILEPATH